^@^@============================= test session starts ============================== platform linux -- Python 3.12.11, pytest-8.4.2, pluggy-1.6.0 -- /opt/conda/envs/nibabies/bin/python cachedir: .pytest_cache rootdir: /tmp plugins: cov-7.0.0, xdist-3.8.0, env-1.1.5 collecting ...  collecting 0 items  collecting 0 items  collecting 49 items  collecting 94 items  collected 552 items  cli/tests/test_parser.py::test_parser_errors[args0-2] usage: pytest [-h] [--version] [--skip_bids_validation] [--participant-label PARTICIPANT_LABEL [PARTICIPANT_LABEL ...]] [-s SESSION_ID [SESSION_ID ...]] [-t TASK_ID] [--echo-idx ECHO_IDX] [--bids-filter-file FILE] [-d PACKAGE=PATH [PACKAGE=PATH ...]] [--bids-database-dir PATH] [--copy-derivatives] [--nprocs NPROCS] [--omp-nthreads OMP_NTHREADS] [--mem MEMORY_GB] [--low-mem] [--use-plugin FILE] [--md-only-boilerplate] [-v] [--anat-only] [--level {minimal,resampling,full}] [--boilerplate-only] [--reports-only] [--ignore {fieldmaps,slicetiming,sbref,t1w,t2w,flair,fmap-jacobian} [{fieldmaps,slicetiming,sbref,t1w,t2w,flair,fmap-jacobian} ...]] [--longitudinal] [--output-spaces [OUTPUT_SPACES ...]] [--me-output-echos] [--bold2anat-init {auto,t1w,t2w,header}] [--bold2anat-dof {6,9,12}] [--force-bbr] [--force-no-bbr] [--medial-surface-nan] [--project-goodvoxels] [--slice-time-ref SLICE_TIME_REF] [--dummy-scans DUMMY_SCANS] [--random-seed _RANDOM_SEED] [--me-t2s-fit-method {curvefit,loglin}] [--return-all-components] [--fd-spike-threshold REGRESSORS_FD_TH] [--dvars-spike-threshold REGRESSORS_DVARS_TH] [--skull-strip-template SKULL_STRIP_TEMPLATE] [--skull-strip-fixed-seed] [--skull-strip-anat {auto,skip,force}] [--fmap-bspline] [--fmap-no-demean] [--use-syn-sdc [{warn,error}]] [--force-syn] [--fs-license-file FILE] [--fs-subjects-dir PATH] [--no-submm-recon] [--cifti-output [{91k,170k}]] [--output-layout {bids,legacy,multiverse}] [-w WORK_DIR] [--clean-workdir CLEAN_WORKDIR] [--resource-monitor] [--config-file FILE] [--write-graph] [--stop-on-first-crash] [--notrack] [--debug {compcor,registration,fieldmaps,pdb,all} [{compcor,registration,fieldmaps,pdb,all} ...]] [--sloppy] [--age-months AGE_MONTHS] [--segmentation-atlases-dir SEGMENTATION_ATLASES_DIR] [--fd-radius FD_RADIUS] [--deriv-filter-file FILE] [--surface-recon-method {auto,infantfs,freesurfer,mcribs,None}] [--reference-anat {T1w,T2w}] [--hmc-bold-frame HMC_BOLD_FRAME] [--norm-csf] [--multi-step-reg | --no-multi-step-reg] bids_dir output_dir {participant} pytest: error: the following arguments are required: bids_dir, output_dir, analysis_level PASSED cli/tests/test_parser.py::test_parser_errors[args1-2] usage: pytest [-h] [--version] [--skip_bids_validation] [--participant-label PARTICIPANT_LABEL [PARTICIPANT_LABEL ...]] [-s SESSION_ID [SESSION_ID ...]] [-t TASK_ID] [--echo-idx ECHO_IDX] [--bids-filter-file FILE] [-d PACKAGE=PATH [PACKAGE=PATH ...]] [--bids-database-dir PATH] [--copy-derivatives] [--nprocs NPROCS] [--omp-nthreads OMP_NTHREADS] [--mem MEMORY_GB] [--low-mem] [--use-plugin FILE] [--md-only-boilerplate] [-v] [--anat-only] [--level {minimal,resampling,full}] [--boilerplate-only] [--reports-only] [--ignore {fieldmaps,slicetiming,sbref,t1w,t2w,flair,fmap-jacobian} [{fieldmaps,slicetiming,sbref,t1w,t2w,flair,fmap-jacobian} ...]] [--longitudinal] [--output-spaces [OUTPUT_SPACES ...]] [--me-output-echos] [--bold2anat-init {auto,t1w,t2w,header}] [--bold2anat-dof {6,9,12}] [--force-bbr] [--force-no-bbr] [--medial-surface-nan] [--project-goodvoxels] [--slice-time-ref SLICE_TIME_REF] [--dummy-scans DUMMY_SCANS] [--random-seed _RANDOM_SEED] [--me-t2s-fit-method {curvefit,loglin}] [--return-all-components] [--fd-spike-threshold REGRESSORS_FD_TH] [--dvars-spike-threshold REGRESSORS_DVARS_TH] [--skull-strip-template SKULL_STRIP_TEMPLATE] [--skull-strip-fixed-seed] [--skull-strip-anat {auto,skip,force}] [--fmap-bspline] [--fmap-no-demean] [--use-syn-sdc [{warn,error}]] [--force-syn] [--fs-license-file FILE] [--fs-subjects-dir PATH] [--no-submm-recon] [--cifti-output [{91k,170k}]] [--output-layout {bids,legacy,multiverse}] [-w WORK_DIR] [--clean-workdir CLEAN_WORKDIR] [--resource-monitor] [--config-file FILE] [--write-graph] [--stop-on-first-crash] [--notrack] [--debug {compcor,registration,fieldmaps,pdb,all} [{compcor,registration,fieldmaps,pdb,all} ...]] [--sloppy] [--age-months AGE_MONTHS] [--segmentation-atlases-dir SEGMENTATION_ATLASES_DIR] [--fd-radius FD_RADIUS] [--deriv-filter-file FILE] [--surface-recon-method {auto,infantfs,freesurfer,mcribs,None}] [--reference-anat {T1w,T2w}] [--hmc-bold-frame HMC_BOLD_FRAME] [--norm-csf] [--multi-step-reg | --no-multi-step-reg] bids_dir output_dir {participant} pytest: error: Path does not exist: . PASSED cli/tests/test_parser.py::test_parser_errors[args2-2] usage: pytest [-h] [--version] [--skip_bids_validation] [--participant-label PARTICIPANT_LABEL [PARTICIPANT_LABEL ...]] [-s SESSION_ID [SESSION_ID ...]] [-t TASK_ID] [--echo-idx ECHO_IDX] [--bids-filter-file FILE] [-d PACKAGE=PATH [PACKAGE=PATH ...]] [--bids-database-dir PATH] [--copy-derivatives] [--nprocs NPROCS] [--omp-nthreads OMP_NTHREADS] [--mem MEMORY_GB] [--low-mem] [--use-plugin FILE] [--md-only-boilerplate] [-v] [--anat-only] [--level {minimal,resampling,full}] [--boilerplate-only] [--reports-only] [--ignore {fieldmaps,slicetiming,sbref,t1w,t2w,flair,fmap-jacobian} [{fieldmaps,slicetiming,sbref,t1w,t2w,flair,fmap-jacobian} ...]] [--longitudinal] [--output-spaces [OUTPUT_SPACES ...]] [--me-output-echos] [--bold2anat-init {auto,t1w,t2w,header}] [--bold2anat-dof {6,9,12}] [--force-bbr] [--force-no-bbr] [--medial-surface-nan] [--project-goodvoxels] [--slice-time-ref SLICE_TIME_REF] [--dummy-scans DUMMY_SCANS] [--random-seed _RANDOM_SEED] [--me-t2s-fit-method {curvefit,loglin}] [--return-all-components] [--fd-spike-threshold REGRESSORS_FD_TH] [--dvars-spike-threshold REGRESSORS_DVARS_TH] [--skull-strip-template SKULL_STRIP_TEMPLATE] [--skull-strip-fixed-seed] [--skull-strip-anat {auto,skip,force}] [--fmap-bspline] [--fmap-no-demean] [--use-syn-sdc [{warn,error}]] [--force-syn] [--fs-license-file FILE] [--fs-subjects-dir PATH] [--no-submm-recon] [--cifti-output [{91k,170k}]] [--output-layout {bids,legacy,multiverse}] [-w WORK_DIR] [--clean-workdir CLEAN_WORKDIR] [--resource-monitor] [--config-file FILE] [--write-graph] [--stop-on-first-crash] [--notrack] [--debug {compcor,registration,fieldmaps,pdb,all} [{compcor,registration,fieldmaps,pdb,all} ...]] [--sloppy] [--age-months AGE_MONTHS] [--segmentation-atlases-dir SEGMENTATION_ATLASES_DIR] [--fd-radius FD_RADIUS] [--deriv-filter-file FILE] [--surface-recon-method {auto,infantfs,freesurfer,mcribs,None}] [--reference-anat {T1w,T2w}] [--hmc-bold-frame HMC_BOLD_FRAME] [--norm-csf] [--multi-step-reg | --no-multi-step-reg] bids_dir output_dir {participant} pytest: error: Path does not exist: . PASSED cli/tests/test_parser.py::test_parser_errors[args3-2] usage: pytest [-h] [--version] [--skip_bids_validation] [--participant-label PARTICIPANT_LABEL [PARTICIPANT_LABEL ...]] [-s SESSION_ID [SESSION_ID ...]] [-t TASK_ID] [--echo-idx ECHO_IDX] [--bids-filter-file FILE] [-d PACKAGE=PATH [PACKAGE=PATH ...]] [--bids-database-dir PATH] [--copy-derivatives] [--nprocs NPROCS] [--omp-nthreads OMP_NTHREADS] [--mem MEMORY_GB] [--low-mem] [--use-plugin FILE] [--md-only-boilerplate] [-v] [--anat-only] [--level {minimal,resampling,full}] [--boilerplate-only] [--reports-only] [--ignore {fieldmaps,slicetiming,sbref,t1w,t2w,flair,fmap-jacobian} [{fieldmaps,slicetiming,sbref,t1w,t2w,flair,fmap-jacobian} ...]] [--longitudinal] [--output-spaces [OUTPUT_SPACES ...]] [--me-output-echos] [--bold2anat-init {auto,t1w,t2w,header}] [--bold2anat-dof {6,9,12}] [--force-bbr] [--force-no-bbr] [--medial-surface-nan] [--project-goodvoxels] [--slice-time-ref SLICE_TIME_REF] [--dummy-scans DUMMY_SCANS] [--random-seed _RANDOM_SEED] [--me-t2s-fit-method {curvefit,loglin}] [--return-all-components] [--fd-spike-threshold REGRESSORS_FD_TH] [--dvars-spike-threshold REGRESSORS_DVARS_TH] [--skull-strip-template SKULL_STRIP_TEMPLATE] [--skull-strip-fixed-seed] [--skull-strip-anat {auto,skip,force}] [--fmap-bspline] [--fmap-no-demean] [--use-syn-sdc [{warn,error}]] [--force-syn] [--fs-license-file FILE] [--fs-subjects-dir PATH] [--no-submm-recon] [--cifti-output [{91k,170k}]] [--output-layout {bids,legacy,multiverse}] [-w WORK_DIR] [--clean-workdir CLEAN_WORKDIR] [--resource-monitor] [--config-file FILE] [--write-graph] [--stop-on-first-crash] [--notrack] [--debug {compcor,registration,fieldmaps,pdb,all} [{compcor,registration,fieldmaps,pdb,all} ...]] [--sloppy] [--age-months AGE_MONTHS] [--segmentation-atlases-dir SEGMENTATION_ATLASES_DIR] [--fd-radius FD_RADIUS] [--deriv-filter-file FILE] [--surface-recon-method {auto,infantfs,freesurfer,mcribs,None}] [--reference-anat {T1w,T2w}] [--hmc-bold-frame HMC_BOLD_FRAME] [--norm-csf] [--multi-step-reg | --no-multi-step-reg] bids_dir output_dir {participant} pytest: error: Path does not exist: . PASSED cli/tests/test_parser.py::test_parser_valid[args0] PASSED cli/tests/test_parser.py::test_parser_valid[args1] PASSED cli/tests/test_parser.py::test_memory_arg[1G-1] PASSED cli/tests/test_parser.py::test_memory_arg[1GB-1] PASSED cli/tests/test_parser.py::test_memory_arg[1000-1] PASSED cli/tests/test_parser.py::test_memory_arg[32000-32] PASSED cli/tests/test_parser.py::test_memory_arg[4000-4] PASSED cli/tests/test_parser.py::test_memory_arg[1000M-1] PASSED cli/tests/test_parser.py::test_memory_arg[1000MB-1] PASSED cli/tests/test_parser.py::test_memory_arg[1T-1000] PASSED cli/tests/test_parser.py::test_memory_arg[1TB-1000] PASSED cli/tests/test_parser.py::test_memory_arg[1000000K-1] PASSED cli/tests/test_parser.py::test_memory_arg[1000000KB-1] PASSED cli/tests/test_parser.py::test_memory_arg[1000000000B-1] PASSED cli/tests/test_parser.py::test_get_parser_update[1.0.0-1.3.2] PASSED cli/tests/test_parser.py::test_get_parser_update[1.3.2-1.3.2] PASSED cli/tests/test_parser.py::test_get_parser_blacklist[flagged0] PASSED cli/tests/test_parser.py::test_get_parser_blacklist[flagged1] PASSED cli/tests/test_parser.py::test_get_parser_blacklist[flagged2] PASSED cli/tests/test_parser.py::test_parse_args PASSED cli/tests/test_parser.py::test_bids_filter_file PASSED cli/tests/test_parser.py::test_slice_time_ref[None] PASSED cli/tests/test_parser.py::test_slice_time_ref[0] PASSED cli/tests/test_parser.py::test_slice_time_ref[1] PASSED cli/tests/test_parser.py::test_slice_time_ref[0.5] PASSED cli/tests/test_parser.py::test_slice_time_ref[start] PASSED cli/tests/test_parser.py::test_slice_time_ref[middle] PASSED cli/tests/test_parser.py::test_use_syn_sdc[args0-False] PASSED cli/tests/test_parser.py::test_use_syn_sdc[args1-error] PASSED cli/tests/test_parser.py::test_use_syn_sdc[args2-error] PASSED cli/tests/test_parser.py::test_use_syn_sdc[args3-warn] PASSED cli/tests/test_parser.py::test_use_syn_sdc[args4-expectation4] usage: pytest [-h] [--version] [--skip_bids_validation] [--participant-label PARTICIPANT_LABEL [PARTICIPANT_LABEL ...]] [-s SESSION_ID [SESSION_ID ...]] [-t TASK_ID] [--echo-idx ECHO_IDX] [--bids-filter-file FILE] [-d PACKAGE=PATH [PACKAGE=PATH ...]] [--bids-database-dir PATH] [--copy-derivatives] [--nprocs NPROCS] [--omp-nthreads OMP_NTHREADS] [--mem MEMORY_GB] [--low-mem] [--use-plugin FILE] [--md-only-boilerplate] [-v] [--anat-only] [--level {minimal,resampling,full}] [--boilerplate-only] [--reports-only] [--ignore {fieldmaps,slicetiming,sbref,t1w,t2w,flair,fmap-jacobian} [{fieldmaps,slicetiming,sbref,t1w,t2w,flair,fmap-jacobian} ...]] [--longitudinal] [--output-spaces [OUTPUT_SPACES ...]] [--me-output-echos] [--bold2anat-init {auto,t1w,t2w,header}] [--bold2anat-dof {6,9,12}] [--force-bbr] [--force-no-bbr] [--medial-surface-nan] [--project-goodvoxels] [--slice-time-ref SLICE_TIME_REF] [--dummy-scans DUMMY_SCANS] [--random-seed _RANDOM_SEED] [--me-t2s-fit-method {curvefit,loglin}] [--return-all-components] [--fd-spike-threshold REGRESSORS_FD_TH] [--dvars-spike-threshold REGRESSORS_DVARS_TH] [--skull-strip-template SKULL_STRIP_TEMPLATE] [--skull-strip-fixed-seed] [--skull-strip-anat {auto,skip,force}] [--fmap-bspline] [--fmap-no-demean] [--use-syn-sdc [{warn,error}]] [--force-syn] [--fs-license-file FILE] [--fs-subjects-dir PATH] [--no-submm-recon] [--cifti-output [{91k,170k}]] [--output-layout {bids,legacy,multiverse}] [-w WORK_DIR] [--clean-workdir CLEAN_WORKDIR] [--resource-monitor] [--config-file FILE] [--write-graph] [--stop-on-first-crash] [--notrack] [--debug {compcor,registration,fieldmaps,pdb,all} [{compcor,registration,fieldmaps,pdb,all} ...]] [--sloppy] [--age-months AGE_MONTHS] [--segmentation-atlases-dir SEGMENTATION_ATLASES_DIR] [--fd-radius FD_RADIUS] [--deriv-filter-file FILE] [--surface-recon-method {auto,infantfs,freesurfer,mcribs,None}] [--reference-anat {T1w,T2w}] [--hmc-bold-frame HMC_BOLD_FRAME] [--norm-csf] [--multi-step-reg | --no-multi-step-reg] bids_dir output_dir {participant} pytest: error: argument --use-syn-sdc: invalid choice: 'other' (choose from warn, error) PASSED cli/tests/test_parser.py::test_derivatives usage: pytest [-h] [--version] [--skip_bids_validation] [--participant-label PARTICIPANT_LABEL [PARTICIPANT_LABEL ...]] [-s SESSION_ID [SESSION_ID ...]] [-t TASK_ID] [--echo-idx ECHO_IDX] [--bids-filter-file FILE] [-d PACKAGE=PATH [PACKAGE=PATH ...]] [--bids-database-dir PATH] [--copy-derivatives] [--nprocs NPROCS] [--omp-nthreads OMP_NTHREADS] [--mem MEMORY_GB] [--low-mem] [--use-plugin FILE] [--md-only-boilerplate] [-v] [--anat-only] [--level {minimal,resampling,full}] [--boilerplate-only] [--reports-only] [--ignore {fieldmaps,slicetiming,sbref,t1w,t2w,flair,fmap-jacobian} [{fieldmaps,slicetiming,sbref,t1w,t2w,flair,fmap-jacobian} ...]] [--longitudinal] [--output-spaces [OUTPUT_SPACES ...]] [--me-output-echos] [--bold2anat-init {auto,t1w,t2w,header}] [--bold2anat-dof {6,9,12}] [--force-bbr] [--force-no-bbr] [--medial-surface-nan] [--project-goodvoxels] [--slice-time-ref SLICE_TIME_REF] [--dummy-scans DUMMY_SCANS] [--random-seed _RANDOM_SEED] [--me-t2s-fit-method {curvefit,loglin}] [--return-all-components] [--fd-spike-threshold REGRESSORS_FD_TH] [--dvars-spike-threshold REGRESSORS_DVARS_TH] [--skull-strip-template SKULL_STRIP_TEMPLATE] [--skull-strip-fixed-seed] [--skull-strip-anat {auto,skip,force}] [--fmap-bspline] [--fmap-no-demean] [--use-syn-sdc [{warn,error}]] [--force-syn] [--fs-license-file FILE] [--fs-subjects-dir PATH] [--no-submm-recon] [--cifti-output [{91k,170k}]] [--output-layout {bids,legacy,multiverse}] [-w WORK_DIR] [--clean-workdir CLEAN_WORKDIR] [--resource-monitor] [--config-file FILE] [--write-graph] [--stop-on-first-crash] [--notrack] [--debug {compcor,registration,fieldmaps,pdb,all} [{compcor,registration,fieldmaps,pdb,all} ...]] [--sloppy] [--age-months AGE_MONTHS] [--segmentation-atlases-dir SEGMENTATION_ATLASES_DIR] [--fd-radius FD_RADIUS] [--deriv-filter-file FILE] [--surface-recon-method {auto,infantfs,freesurfer,mcribs,None}] [--reference-anat {T1w,T2w}] [--hmc-bold-frame HMC_BOLD_FRAME] [--norm-csf] [--multi-step-reg | --no-multi-step-reg] bids_dir output_dir {participant} pytest: error: argument -d/--derivatives: expected at least one argument PASSED cli/tests/test_parser.py::test_surface_recon_method[args0-auto] PASSED cli/tests/test_parser.py::test_surface_recon_method[args1-auto] PASSED cli/tests/test_parser.py::test_surface_recon_method[args2-mcribs] PASSED cli/tests/test_parser.py::test_surface_recon_method[args3-infantfs] PASSED cli/tests/test_parser.py::test_surface_recon_method[args4-freesurfer] PASSED cli/tests/test_parser.py::test_surface_recon_method[args5-None] PASSED cli/tests/test_parser.py::test_surface_recon_method[args6-None] PASSED cli/tests/test_parser.py::test_surface_recon_method[args7-expectation7] PASSED interfaces/bids.py::nibabies.interfaces.bids._find_nearest_path PASSED interfaces/confounds.py::nibabies.interfaces.confounds PASSED interfaces/confounds.py::nibabies.interfaces.confounds.GatherConfounds PASSED interfaces/confounds.py::nibabies.interfaces.confounds._gather_confounds PASSED interfaces/multiecho.py::nibabies.interfaces.multiecho PASSED interfaces/multiecho.py::nibabies.interfaces.multiecho.T2SMap PASSED interfaces/patches.py::nibabies.interfaces.patches.ConcatXFM PASSED interfaces/tests/test_bids.py::test_BIDSURI PASSED interfaces/tests/test_mcribs.py::test_MCRIBReconAll PASSED interfaces/tests/test_nibabel.py::test_reorient_image[RAS-RAS] PASSED interfaces/tests/test_nibabel.py::test_reorient_image[RAS-LAS] PASSED interfaces/tests/test_nibabel.py::test_reorient_image[LAS-RAS] PASSED interfaces/tests/test_nibabel.py::test_reorient_image[RAS-RPI] PASSED interfaces/tests/test_nibabel.py::test_reorient_image[LPI-RAS] PASSED interfaces/workbench.py::nibabies.interfaces.workbench.CiftiCreateDenseFromTemplate PASSED interfaces/workbench.py::nibabies.interfaces.workbench.CiftiCreateDenseTimeseries PASSED interfaces/workbench.py::nibabies.interfaces.workbench.CiftiCreateLabel PASSED interfaces/workbench.py::nibabies.interfaces.workbench.CiftiResample PASSED interfaces/workbench.py::nibabies.interfaces.workbench.CiftiSeparate PASSED interfaces/workbench.py::nibabies.interfaces.workbench.VolumeAffineResample PASSED interfaces/workbench.py::nibabies.interfaces.workbench.VolumeAllLabelsToROIs PASSED interfaces/workbench.py::nibabies.interfaces.workbench.VolumeLabelExportTable PASSED interfaces/workbench.py::nibabies.interfaces.workbench.VolumeLabelImport PASSED tests/test_config.py::test_reset_config PASSED tests/test_config.py::test_config_spaces PASSED tests/test_config.py::test_prng_seed[1-17612-8272] PASSED tests/test_config.py::test_prng_seed[100-19094-60232] PASSED tests/test_config.py::test_hash_config PASSED utils/bids.py::nibabies.utils.bids.age_to_months PASSED utils/bids.py::nibabies.utils.bids.extract_entities PASSED utils/misc.py::nibabies.utils.misc.combine_meepi_source PASSED utils/misc.py::nibabies.utils.misc.fix_multi_source_name PASSED utils/tests/test_bids.py::test_get_age_from_tsv[session_id-ses-1-data0-months-4] PASSED utils/tests/test_bids.py::test_get_age_from_tsv[session_id-ses-1-data1-weeks-1] PASSED utils/tests/test_bids.py::test_get_age_from_tsv[session_id-ses-2-data2-False-2] PASSED utils/tests/test_bids.py::test_get_age_from_tsv[participant_id-sub-1-data3-False-3] PASSED utils/tests/test_bids.py::test_get_age_from_tsv[participant_id-sub-11-data4-False-24] PASSED utils/tests/test_bids.py::test_get_age_from_tsv[session_id-ses-3-data5-False-9] PASSED utils/tests/test_bids.py::test_get_age_from_tsv[filename-^anat.*-data6-False-6] PASSED utils/tests/test_bids.py::test_get_age_from_tsv_error PASSED utils/tests/test_bids.py::test_get_age_from_tsv_warning PASSED utils/tests/test_derivatives.py::test_collect_derivatives PASSED utils/tests/test_derivatives.py::test_copy_derivatives PASSED workflows/anatomical/tests/test_preproc.py::test_csf_norm_wf PASSED workflows/anatomical/tests/test_preproc.py::test_conform_derivative_wf[False-False] PASSED workflows/anatomical/tests/test_preproc.py::test_conform_derivative_wf[True-False] PASSED workflows/anatomical/tests/test_preproc.py::test_conform_derivative_wf[False-True] PASSED workflows/anatomical/tests/test_preproc.py::test_conform_derivative_wf[True-True] PASSED workflows/base.py::nibabies.workflows.base._subject_session_id PASSED workflows/bold/alignment.py::nibabies.workflows.bold.alignment.parse_roi_labels PASSED workflows/bold/base.py::nibabies.workflows.bold.base._get_wf_name PASSED workflows/bold/base.py::nibabies.workflows.bold.base.extract_entities PASSED workflows/bold/outputs.py::nibabies.workflows.bold.outputs.prepare_timing_parameters PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root0-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root1-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore0-bids_filters0-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-t1w-None-None-False-False-False-False-True-auto-False-False-auto-ignore1-bids_filters1-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-t2w-None-None-False-False-False-False-True-auto-False-False-auto-ignore2-bids_filters2-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-header-None-None-False-False-False-False-True-auto-False-False-auto-ignore3-bids_filters3-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-True-None-False-False-False-False-True-auto-False-False-auto-ignore4-bids_filters4-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-False-None-False-False-False-False-True-auto-False-False-auto-ignore5-bids_filters5-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-header-True-None-False-False-False-False-True-auto-False-False-auto-ignore6-bids_filters6-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-2-False-False-False-False-True-auto-False-False-auto-ignore7-bids_filters7-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-True-False-False-False-True-auto-False-False-auto-ignore8-bids_filters8-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-True-False-False-True-auto-False-False-auto-ignore9-bids_filters9-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-91k-True-auto-False-False-auto-ignore10-bids_filters10-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-True-91k-True-auto-False-False-auto-ignore11-bids_filters11-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-91k-False-auto-False-False-auto-ignore12-bids_filters12-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-force-False-False-auto-ignore13-bids_filters13-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-skip-False-False-auto-ignore14-bids_filters14-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-None-ignore15-bids_filters15-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-True-None-False-False-False-False-True-auto-False-False-None-ignore16-bids_filters16-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-False-None-False-False-False-False-True-auto-False-False-None-ignore17-bids_filters17-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore18-bids_filters18-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-infantfs-ignore19-bids_filters19-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-freesurfer-ignore20-bids_filters20-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore21-bids_filters21-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore22-bids_filters22-True-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore23-bids_filters23-False-True-True-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-False-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-False-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-False-full] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-True-minimal] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-True-resampling] PASSED workflows/tests/test_base.py::test_init_nibabies_wf[bids_root2-auto-None-None-False-False-False-False-True-auto-False-False-auto-ignore24-bids_filters24-False-False-True-full] PASSED workflows/tests/test_base.py::test_get_estimator_none PASSED workflows/tests/test_base.py::test_get_estimator_b0field_and_intendedfor PASSED workflows/tests/test_base.py::test_get_estimator_overlapping_specs PASSED workflows/tests/test_base.py::test_get_estimator_multiple_b0fields PASSED =============================== warnings summary =============================== ../opt/conda/envs/nibabies/lib/python3.12/site-packages/nibabies/interfaces/reports.py:23 /opt/conda/envs/nibabies/lib/python3.12/site-packages/nibabies/interfaces/reports.py:23: PendingDeprecationWarning: Niworkflows will be deprecating reporting in favor of a standalone library "nireports". from niworkflows.interfaces.reportlets import base as nrb ../opt/conda/envs/nibabies/lib/python3.12/site-packages/niworkflows/interfaces/reportlets/base.py:29 /opt/conda/envs/nibabies/lib/python3.12/site-packages/niworkflows/interfaces/reportlets/base.py:29: PendingDeprecationWarning: Niworkflows will be deprecating visualizations in favor of a standalone library "nireports". from ...viz.utils import compose_view, cuts_from_bbox ../opt/conda/envs/nibabies/lib/python3.12/site-packages/smriprep/workflows/surfaces.py:47 /opt/conda/envs/nibabies/lib/python3.12/site-packages/smriprep/workflows/surfaces.py:47: DeprecationWarning: The numpy.linalg.linalg has been made private and renamed to numpy.linalg._linalg. All public functions exported by it are available from numpy.linalg. Please use numpy.linalg.LinAlgError instead. from niworkflows.interfaces.patches import FreeSurferSource interfaces/confounds.py::nibabies.interfaces.confounds.GatherConfounds :1: SyntaxWarning: invalid escape sequence '\s' interfaces/confounds.py::nibabies.interfaces.confounds._gather_confounds :1: SyntaxWarning: invalid escape sequence '\s' workflows/tests/test_base.py: 675 warnings /opt/conda/envs/nibabies/lib/python3.12/site-packages/niworkflows/func/util.py:388: DeprecationWarning: niworkflows.interfaces.nibabel.BinaryDilation is deprecated in favor of niworkflows.interfaces.morphology.BinaryDilation. Please validate that interface for your use case and switch. first_dilate = pe.Node(BinaryDilation(radius=6), name='first_dilate') workflows/tests/test_base.py: 18 warnings /opt/conda/envs/nibabies/lib/python3.12/site-packages/nibabies/workflows/anatomical/apply.py:198: DeprecationWarning: Deprecated grayord_density passed. Replace with density='32k' if grayord_density == '91k' else '59k' resample_surfaces_wf = init_resample_surfaces_wf( workflows/tests/test_base.py: 18 warnings /opt/conda/envs/nibabies/lib/python3.12/site-packages/nibabies/workflows/anatomical/brain_extraction.py:131: DeprecationWarning: niworkflows.interfaces.nibabel.BinaryDilation is deprecated in favor of niworkflows.interfaces.morphology.BinaryDilation. Please validate that interface for your use case and switch. refine_mask = pe.Node(BinaryDilation(radius=3, iterations=2), name='refine_mask') -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ================ 552 passed, 716 warnings in 963.56s (0:16:03) =================